STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SYNGR2Synaptogyrin 2. (224 aa)    
Predicted Functional Partners:
TMC8
Transmembrane channel like 8.
 
    
 0.681
SYP
Synaptophysin.
    
 
 0.612
PRPF38A
pre-mRNA processing factor 38A.
   
  
 0.607
TMCC2
Transmembrane and coiled-coil domain family 2.
      
 0.596
TMC6
Transmembrane channel like 6.
      
 0.564
NAT9
N-acetyltransferase 9 (putative).
      
 0.557
FLYWCH2
FLYWCH family member 2.
      
 0.556
HCFC1R1
Host cell factor C1 regulator 1.
      
 0.556
IFT80
Intraflagellar transport 80.
      
 0.541
SEPTIN9
Septin 9.
      
 0.527
Your Current Organism:
Pteropus vampyrus
NCBI taxonomy Id: 132908
Other names: P. vampyrus, large flying fox
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.