STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
IFI30IFI30 lysosomal thiol reductase. (246 aa)    
Predicted Functional Partners:
WDR90
WD repeat domain 90.
    
   0.705
ENSPVAP00000000395
annotation not available
      
 0.692
ENSPVAP00000007749
annotation not available
      
 0.662
DKK3
Dickkopf WNT signaling pathway inhibitor 3.
      
 0.636
ENSPVAP00000016823
annotation not available
    
 
 0.612
SLA2
Src like adaptor 2.
    
 
 0.603
ENSPVAP00000002564
annotation not available
    
   0.590
SPAG8
Sperm associated antigen 8.
    
   0.590
C19orf71
Chromosome 19 open reading frame 71.
    
   0.590
C9orf135
Chromosome 9 open reading frame 135.
    
   0.590
Your Current Organism:
Pteropus vampyrus
NCBI taxonomy Id: 132908
Other names: P. vampyrus, large flying fox
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.