Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LAMA2Laminin subunit alpha 2. (3118 aa)    
Predicted Functional Partners:
DAG1
Dystroglycan 1.
    
 0.988
LAMB1
Laminin subunit beta 1.
   
 0.970
ITGA7
Integrin subunit alpha 7.
    
 0.967
ITGA1
Integrin subunit alpha 1.
    
 0.950
ITGA3
Integrin subunit alpha 3.
    
 0.948
ITGB1
Integrin subunit beta 1.
    
 0.944
ITGA9
Integrin subunit alpha 9.
    
 0.941
ITGB4
Integrin subunit beta 4.
    
 0.938
ITGAV
Integrin subunit alpha V.
    
 0.937
ITGA2
Integrin subunit alpha 2.
    
 0.936
Your Current Organism:
Pteropus vampyrus
NCBI taxonomy Id: 132908
Other names: P. vampyrus, large flying fox
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