STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SUSD1Sushi domain containing 1. (720 aa)    
Predicted Functional Partners:
HSPA4L
Heat shock protein family A (Hsp70) member 4 like.
    
 
 0.821
CCDC115
Coiled-coil domain containing 115.
    
 
 0.807
TBC1D9B
TBC1 domain family member 9B.
      
 0.803
AP5M1
Adaptor related protein complex 5 subunit mu 1.
      
 0.801
YES1
YES proto-oncogene 1, Src family tyrosine kinase.
    
 0.786
CNTN3
Contactin 3.
    
 0.779
SPG11
SPG11 vesicle trafficking associated, spatacsin.
      
 0.776
CNKSR2
Connector enhancer of kinase suppressor of Ras 2.
      
 0.773
ENSPVAP00000004406
ATP6V1G2-DDX39B readthrough (NMD candidate).
      
 0.769
CNTN2
Contactin 2.
    
 0.708
Your Current Organism:
Pteropus vampyrus
NCBI taxonomy Id: 132908
Other names: P. vampyrus, large flying fox
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.