STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LRRIQ3Leucine rich repeats and IQ motif containing 3. (624 aa)    
Predicted Functional Partners:
FAM227B
Family with sequence similarity 227 member B.
  
   
 0.815
SERP1
Stress associated endoplasmic reticulum protein 1.
      
 0.769
ADGRL2
Adhesion G protein-coupled receptor L2.
    
   0.760
ADGRL3
Adhesion G protein-coupled receptor L3.
    
   0.760
ADGRL1
Adhesion G protein-coupled receptor L1.
    
   0.760
ENSPVAP00000002218
annotation not available
    
 0.756
SIAH2
Siah E3 ubiquitin protein ligase 2.
    
 
 0.756
ZNF215
Zinc finger protein 215.
    
 
 0.738
ENSPVAP00000001472
annotation not available
    
 
 0.725
NTNG1
Netrin G1.
    
 0.711
Your Current Organism:
Pteropus vampyrus
NCBI taxonomy Id: 132908
Other names: P. vampyrus, large flying fox
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.