STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PCDHB16Protocadherin beta 16. (775 aa)    
Predicted Functional Partners:
ENSPVAP00000016322
annotation not available
 
  
 
0.640
JUP
Junction plakoglobin.
    
 0.507
UCK1
Uridine-cytidine kinase 1.
    
  0.506
UCK2
Uridine-cytidine kinase 2.
    
  0.506
CTNNB1
Catenin beta 1.
    
  0.506
UCKL1
Uridine-cytidine kinase 1 like 1.
    
  0.506
LHFPL2
LHFPL tetraspan subfamily member 2.
    
  0.482
FAT1
FAT atypical cadherin 1.
    
 
0.479
FAT2
FAT atypical cadherin 2.
    
 
0.479
MYO9B
Myosin IXB.
    
  0.477
Your Current Organism:
Pteropus vampyrus
NCBI taxonomy Id: 132908
Other names: P. vampyrus, large flying fox
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.