STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TRIM3Tripartite motif containing 3. (744 aa)    
Predicted Functional Partners:
UBB
Ubiquitin B.
    
  0.838
ENSPVAP00000015543
annotation not available
    
  0.818
TRIM66
Tripartite motif containing 66.
      
0.727
RAI2
Retinoic acid induced 2.
    
 0.706
KIF21B
Kinesin family member 21B.
    
 
 0.700
TRIM35
Tripartite motif containing 35.
      
0.665
EI24
EI24 autophagy associated transmembrane protein.
      
 0.653
UBE2D3
Ubiquitin conjugating enzyme E2 D3.
    
  0.640
UBE2D1
Ubiquitin conjugating enzyme E2 D1.
    
  0.640
UBE2D2
Ubiquitin conjugating enzyme E2 D2.
    
  0.640
Your Current Organism:
Pteropus vampyrus
NCBI taxonomy Id: 132908
Other names: P. vampyrus, large flying fox
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.