STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CRATCarnitine O-acetyltransferase. (625 aa)    
Predicted Functional Partners:
SLC18A3
Solute carrier family 18 member A3.
 
 
  
 0.889
SCP2
Sterol carrier protein 2.
   
 0.862
ACOX2
acyl-CoA oxidase 2.
   
 0.858
AUH
AU RNA binding methylglutaconyl-CoA hydratase.
   
 0.847
HSDL2
Hydroxysteroid dehydrogenase like 2.
   
 0.832
SLC25A20
Solute carrier family 25 member 20.
   
 
 0.828
ACOX1
acyl-CoA oxidase 1.
   
 0.817
PEX5L
Peroxisomal biogenesis factor 5 like.
    
 0.785
PEX5
Peroxisomal biogenesis factor 5.
    
 0.785
CPT2
Carnitine palmitoyltransferase 2.
  
0.779
Your Current Organism:
Pteropus vampyrus
NCBI taxonomy Id: 132908
Other names: P. vampyrus, large flying fox
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.