STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EIPR1EARP complex and GARP complex interacting protein 1. (414 aa)    
Predicted Functional Partners:
VPS53
VPS53 subunit of GARP complex.
    
 
 0.939
VPS54
VPS54 subunit of GARP complex.
    
 
 0.932
VPS51
VPS51 subunit of GARP complex.
   
 
 0.923
VPS50
VPS50 subunit of EARP/GARPII complex.
    
 
 0.921
VPS52
VPS52 subunit of GARP complex.
    
 
 0.904
CCDC186
Coiled-coil domain containing 186.
      
 0.806
CPD
Carboxypeptidase D.
      
 0.800
ENGASE
endo-beta-N-acetylglucosaminidase.
      
 0.769
DTWD2
DTW domain containing 2.
      
 0.730
ST6GAL1
ST6 beta-galactoside alpha-2,6-sialyltransferase 1.
      
 0.711
Your Current Organism:
Pteropus vampyrus
NCBI taxonomy Id: 132908
Other names: P. vampyrus, large flying fox
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.