STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RUNDC3ARUN domain containing 3A. (439 aa)    
Predicted Functional Partners:
TMEM19
Transmembrane protein 19.
      
 0.800
LIPN
Lipase family member N.
      
 0.795
UVRAG
UV radiation resistance associated.
    
 0.737
ENSPVAP00000004435
annotation not available
      
 0.695
ENSPVAP00000002188
annotation not available
      
 0.694
KCTD20
Potassium channel tetramerization domain containing 20.
      
 0.659
COL16A1
Collagen type XVI alpha 1 chain.
      
 0.626
NPTXR
Neuronal pentraxin receptor.
   
  
 0.617
AP2S1
Adaptor related protein complex 2 subunit sigma 1.
    
   0.605
FBXL16
F-box and leucine rich repeat protein 16.
   
  
 0.598
Your Current Organism:
Pteropus vampyrus
NCBI taxonomy Id: 132908
Other names: P. vampyrus, large flying fox
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.