STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEC22CSEC22 homolog C, vesicle trafficking protein. (303 aa)    
Predicted Functional Partners:
ENSPVAP00000002256
annotation not available
    
 0.977
STX5
Syntaxin 5.
   
 0.973
BET1
Bet1 golgi vesicular membrane trafficking protein.
   
 0.973
YKT6
YKT6 v-SNARE homolog.
    
 0.970
BET1L
Bet1 golgi vesicular membrane trafficking protein like.
    
 0.957
SCFD1
Sec1 family domain containing 1.
   
 0.953
STX18
Syntaxin 18.
   
 0.946
GOSR1
Golgi SNAP receptor complex member 1.
    
 
 0.938
BNIP1
BCL2 interacting protein 1.
   
 0.934
SEC23A
Sec23 homolog A, coat complex II component.
   
 0.917
Your Current Organism:
Pteropus vampyrus
NCBI taxonomy Id: 132908
Other names: P. vampyrus, large flying fox
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.