STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSPVAP00000003172annotation not available (677 aa)    
Predicted Functional Partners:
GTF2H1
General transcription factor IIH subunit 1.
    
 
 0.999
USP7
Ubiquitin specific peptidase 7.
    
 0.987
ERCC8
ERCC excision repair 8, CSA ubiquitin ligase complex subunit.
    
 
 0.964
ERCC6
ERCC excision repair 6, chromatin remodeling factor.
    
 
 0.941
LEO1
LEO1 homolog, Paf1/RNA polymerase II complex component.
    
 
 0.924
DDB1
Damage specific DNA binding protein 1.
    
 
 0.874
WDR61
WD repeat domain 61.
    
 
 0.868
USP40
Ubiquitin specific peptidase 40.
    
 0.843
CUL4A
Cullin 4A.
    
 
 0.779
ERCC1
ERCC excision repair 1, endonuclease non-catalytic subunit.
      
 0.769
Your Current Organism:
Pteropus vampyrus
NCBI taxonomy Id: 132908
Other names: P. vampyrus, large flying fox
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.