STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
WDR4WD repeat domain 4. (414 aa)    
Predicted Functional Partners:
METTL1
Methyltransferase like 1.
   
 0.999
PUS1
Pseudouridine synthase 1.
   
 
 0.956
TRMT61B
tRNA methyltransferase 61B.
   
  
 0.872
ENSPVAP00000002187
annotation not available
   
  
 0.835
ENSPVAP00000004240
annotation not available
   
 
 0.829
FTSJ3
FtsJ RNA 2'-O-methyltransferase 3.
   
  
 0.817
ENSPVAP00000016725
annotation not available
   
    0.816
WDR73
WD repeat domain 73.
   
  
 0.814
YRDC
yrdC N6-threonylcarbamoyltransferase domain containing.
   
  
 0.813
HGH1
HGH1 homolog.
   
    0.811
Your Current Organism:
Pteropus vampyrus
NCBI taxonomy Id: 132908
Other names: P. vampyrus, large flying fox
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.