STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CHST4Carbohydrate sulfotransferase 4. (386 aa)    
Predicted Functional Partners:
FAM210B
Family with sequence similarity 210 member B.
      
 0.769
LMBR1
Limb development membrane protein 1.
      
 0.769
KERA
Keratocan.
     
 0.741
ST3GAL6
ST3 beta-galactoside alpha-2,3-sialyltransferase 6.
      
 0.739
ENSPVAP00000011277
annotation not available
    
 
0.724
B3GNT3
UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 3.
      
 0.697
LUM
Lumican.
     
 0.676
SPNS2
Sphingolipid transporter 2.
      
 0.658
ENPP2
Ectonucleotide pyrophosphatase/phosphodiesterase 2.
      
 0.595
OGN
Osteoglycin.
     
 0.586
Your Current Organism:
Pteropus vampyrus
NCBI taxonomy Id: 132908
Other names: P. vampyrus, large flying fox
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.