STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DNMT1DNA methyltransferase 1. (1610 aa)    
Predicted Functional Partners:
UBB
Ubiquitin B.
    
 
 0.999
UBA52
Ubiquitin A-52 residue ribosomal protein fusion product 1.
    
 
 0.999
UHRF1
Ubiquitin like with PHD and ring finger domains 1.
  
 0.993
DNMT3A
DNA methyltransferase 3 alpha.
    
 0.986
EZH2
Enhancer of zeste 2 polycomb repressive complex 2 subunit.
   
 0.981
DNMT3B
DNA methyltransferase 3 beta.
    
 0.966
UHRF2
Ubiquitin like with PHD and ring finger domains 2.
  
 0.956
USP7
Ubiquitin specific peptidase 7.
   
 
 0.954
PCNA
Proliferating cell nuclear antigen.
   
   0.932
MAT2B
Methionine adenosyltransferase 2B.
    
 0.922
Your Current Organism:
Pteropus vampyrus
NCBI taxonomy Id: 132908
Other names: P. vampyrus, large flying fox
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.