Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
EGFR | ERBB2 | ENSPVAP00000010800 | ENSPVAP00000008053 | Epidermal growth factor receptor. | Erb-b2 receptor tyrosine kinase 2. | 0.998 |
EGFR | ERBB3 | ENSPVAP00000010800 | ENSPVAP00000007137 | Epidermal growth factor receptor. | Erb-b2 receptor tyrosine kinase 3. | 0.992 |
EGFR | GRB2 | ENSPVAP00000010800 | ENSPVAP00000007969 | Epidermal growth factor receptor. | Growth factor receptor bound protein 2. | 0.999 |
EGFR | IGF1R | ENSPVAP00000010800 | ENSPVAP00000003096 | Epidermal growth factor receptor. | Insulin like growth factor 1 receptor. | 0.960 |
EGFR | NTRK2 | ENSPVAP00000010800 | ENSPVAP00000012782 | Epidermal growth factor receptor. | Neurotrophic receptor tyrosine kinase 2. | 0.766 |
EGFR | NTRK3 | ENSPVAP00000010800 | ENSPVAP00000000411 | Epidermal growth factor receptor. | Neurotrophic receptor tyrosine kinase 3. | 0.843 |
EGFR | SHC3 | ENSPVAP00000010800 | ENSPVAP00000003507 | Epidermal growth factor receptor. | SHC adaptor protein 3. | 0.978 |
EGFR | SOS1 | ENSPVAP00000010800 | ENSPVAP00000001372 | Epidermal growth factor receptor. | SOS Ras/Rac guanine nucleotide exchange factor 1. | 0.997 |
EGFR | SOS2 | ENSPVAP00000010800 | ENSPVAP00000005834 | Epidermal growth factor receptor. | SOS Ras/Rho guanine nucleotide exchange factor 2. | 0.982 |
EGFR | SRC | ENSPVAP00000010800 | ENSPVAP00000016775 | Epidermal growth factor receptor. | SRC proto-oncogene, non-receptor tyrosine kinase. | 0.988 |
ERBB2 | EGFR | ENSPVAP00000008053 | ENSPVAP00000010800 | Erb-b2 receptor tyrosine kinase 2. | Epidermal growth factor receptor. | 0.998 |
ERBB2 | ERBB3 | ENSPVAP00000008053 | ENSPVAP00000007137 | Erb-b2 receptor tyrosine kinase 2. | Erb-b2 receptor tyrosine kinase 3. | 0.995 |
ERBB2 | GRB2 | ENSPVAP00000008053 | ENSPVAP00000007969 | Erb-b2 receptor tyrosine kinase 2. | Growth factor receptor bound protein 2. | 0.987 |
ERBB2 | IGF1R | ENSPVAP00000008053 | ENSPVAP00000003096 | Erb-b2 receptor tyrosine kinase 2. | Insulin like growth factor 1 receptor. | 0.985 |
ERBB2 | NTRK2 | ENSPVAP00000008053 | ENSPVAP00000012782 | Erb-b2 receptor tyrosine kinase 2. | Neurotrophic receptor tyrosine kinase 2. | 0.714 |
ERBB2 | NTRK3 | ENSPVAP00000008053 | ENSPVAP00000000411 | Erb-b2 receptor tyrosine kinase 2. | Neurotrophic receptor tyrosine kinase 3. | 0.870 |
ERBB2 | SHC3 | ENSPVAP00000008053 | ENSPVAP00000003507 | Erb-b2 receptor tyrosine kinase 2. | SHC adaptor protein 3. | 0.960 |
ERBB2 | SOS1 | ENSPVAP00000008053 | ENSPVAP00000001372 | Erb-b2 receptor tyrosine kinase 2. | SOS Ras/Rac guanine nucleotide exchange factor 1. | 0.831 |
ERBB2 | SOS2 | ENSPVAP00000008053 | ENSPVAP00000005834 | Erb-b2 receptor tyrosine kinase 2. | SOS Ras/Rho guanine nucleotide exchange factor 2. | 0.827 |
ERBB2 | SRC | ENSPVAP00000008053 | ENSPVAP00000016775 | Erb-b2 receptor tyrosine kinase 2. | SRC proto-oncogene, non-receptor tyrosine kinase. | 0.961 |
page 1 of 6