STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NDC1NDC1 transmembrane nucleoporin. (672 aa)    
Predicted Functional Partners:
NUP188
Nucleoporin 188.
    
 0.997
NUP93
Nucleoporin 93.
   
 0.996
AAAS
Aladin WD repeat nucleoporin.
   
 0.996
NUP155
Nucleoporin 155.
   
 0.995
NUP205
Nucleoporin 205.
   
 0.993
NUP85
Nucleoporin 85.
   
 0.988
NUP43
Nucleoporin 43.
   
 0.987
NUP35
Nucleoporin 35.
    
 0.987
NUP98
Nucleoporin 98.
    
 0.983
RANBP2
RAN binding protein 2.
    
 0.979
Your Current Organism:
Pteropus vampyrus
NCBI taxonomy Id: 132908
Other names: P. vampyrus, large flying fox
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.