STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RBM25RNA binding motif protein 25. (841 aa)    
Predicted Functional Partners:
LUC7L3
LUC7 like 3 pre-mRNA splicing factor.
   
 0.998
SNRPC
Small nuclear ribonucleoprotein polypeptide C.
   
 
 0.992
SART1
Spliceosome associated factor 1, recruiter of U4/U6.U5 tri-snRNP.
   
 
 0.992
SRRM1
Serine and arginine repetitive matrix 1.
   
 0.991
NCBP2
Nuclear cap binding protein subunit 2.
   
 
 0.990
PRPF40A
pre-mRNA processing factor 40 homolog A.
   
 0.988
RBM39
RNA binding motif protein 39.
   
 0.986
TCERG1
Transcription elongation regulator 1.
   
 
 0.984
SF3B3
Splicing factor 3b subunit 3.
    
 
 0.982
SRRM2
Serine/arginine repetitive matrix 2.
   
 0.980
Your Current Organism:
Pteropus vampyrus
NCBI taxonomy Id: 132908
Other names: P. vampyrus, large flying fox
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.