STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HPS6HPS6 biogenesis of lysosomal organelles complex 2 subunit 3. (775 aa)    
Predicted Functional Partners:
HPS3
HPS3 biogenesis of lysosomal organelles complex 2 subunit 1.
   
 
 0.894
HPS5
HPS5 biogenesis of lysosomal organelles complex 2 subunit 2.
    
 
 0.888
AP3D1
Adaptor related protein complex 3 subunit delta 1.
      
 0.773
BLOC1S6
Biogenesis of lysosomal organelles complex 1 subunit 6.
      
 0.769
BLOC1S4
Biogenesis of lysosomal organelles complex 1 subunit 4.
      
 0.696
ENSPVAP00000013155
annotation not available
      
 0.606
SBF2
SET binding factor 2.
      
 0.580
LYST
Lysosomal trafficking regulator.
      
 0.559
TECPR2
Tectonin beta-propeller repeat containing 2.
    
 
 0.528
CCDC117
Coiled-coil domain containing 117.
      
 0.516
Your Current Organism:
Pteropus vampyrus
NCBI taxonomy Id: 132908
Other names: P. vampyrus, large flying fox
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.