STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B3GALNT1beta-1,3-N-acetylgalactosaminyltransferase 1 (globoside blood group). (331 aa)    
Predicted Functional Partners:
B4GALT4
Beta-1,4-galactosyltransferase 4.
   
 
 0.939
ST3GAL2
ST3 beta-galactoside alpha-2,3-sialyltransferase 2.
     
 0.935
B4GALT2
Beta-1,4-galactosyltransferase 2.
   
 
 0.934
ST3GAL3
ST3 beta-galactoside alpha-2,3-sialyltransferase 3.
     
 0.932
A3GALT2
Alpha 1,3-galactosyltransferase 2.
     
 0.924
ST3GAL1
ST3 beta-galactoside alpha-2,3-sialyltransferase 1.
     
 0.912
NAGA
alpha-N-acetylgalactosaminidase.
   
 
 0.904
B4GALT1
Beta-1,4-galactosyltransferase 1.
   
 
 0.899
B4GALT3
Beta-1,4-galactosyltransferase 3.
   
 
 0.898
ST3GAL4
ST3 beta-galactoside alpha-2,3-sialyltransferase 4.
     
 0.887
Your Current Organism:
Pteropus vampyrus
NCBI taxonomy Id: 132908
Other names: P. vampyrus, large flying fox
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