STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KLHDC8AKelch domain containing 8A. (348 aa)    
Predicted Functional Partners:
TMEM71
Transmembrane protein 71.
      
 0.769
CCDC18
Coiled-coil domain containing 18.
      
 0.745
RAB42
RAB42, member RAS oncogene family.
      
 0.690
CUL1
Cullin 1.
    
 0.641
CACUL1
CDK2 associated cullin domain 1.
    
 0.641
CUL3
Cullin 3.
    
 0.641
PEX7
Peroxisomal biogenesis factor 7.
    
   0.605
ENSPVAP00000003529
annotation not available
     
 0.579
GAS2L3
Growth arrest specific 2 like 3.
   
  
 0.575
TXNDC9
Thioredoxin domain containing 9.
    
   0.572
Your Current Organism:
Pteropus vampyrus
NCBI taxonomy Id: 132908
Other names: P. vampyrus, large flying fox
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.