STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UBP1Upstream binding protein 1. (538 aa)    
Predicted Functional Partners:
BZW1
Basic leucine zipper and W2 domains 1.
      
 0.769
ENSPVAP00000003938
annotation not available
      
 0.699
FBXL2
F-box and leucine rich repeat protein 2.
      
 0.692
TFCP2L1
Transcription factor CP2 like 1.
  
 
  
0.602
ERP29
Endoplasmic reticulum protein 29.
      
 0.602
TFCP2
Transcription factor CP2.
  
 
  
0.599
ANKRD29
Ankyrin repeat domain 29.
    
   0.589
RPL21
Ribosomal protein L21.
      
 0.578
ENSPVAP00000009983
annotation not available
   
 
 0.578
POFUT1
Protein O-fucosyltransferase 1.
   
  
 0.576
Your Current Organism:
Pteropus vampyrus
NCBI taxonomy Id: 132908
Other names: P. vampyrus, large flying fox
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.