STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LMBRD1LMBR1 domain containing 1. (542 aa)    
Predicted Functional Partners:
ABCD4
ATP binding cassette subfamily D member 4.
    
 0.972
ABCD3
ATP binding cassette subfamily D member 3.
    
 0.759
SLC35F1
Solute carrier family 35 member F1.
      
 0.748
B3GAT2
Beta-1,3-glucuronyltransferase 2.
      
 0.742
MRAP2
Melanocortin 2 receptor accessory protein 2.
      
 0.738
ABCD2
ATP binding cassette subfamily D member 2.
    
 0.705
ABCD1
ATP binding cassette subfamily D member 1.
    
 0.705
OMA1
OMA1 zinc metallopeptidase.
      
 0.596
LYPD6
LY6/PLAUR domain containing 6.
      
 0.581
LRPAP1
LDL receptor related protein associated protein 1.
      
 0.569
Your Current Organism:
Pteropus vampyrus
NCBI taxonomy Id: 132908
Other names: P. vampyrus, large flying fox
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.