STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SETDB1SET domain bifurcated histone lysine methyltransferase 1. (1291 aa)    
Predicted Functional Partners:
ATF7IP
Activating transcription factor 7 interacting protein.
   
 0.994
ARL14EP
ADP ribosylation factor like GTPase 14 effector protein.
    
 
 0.975
ATF7IP2
Activating transcription factor 7 interacting protein 2.
   
 0.908
CAMKMT
Calmodulin-lysine N-methyltransferase.
     
 0.888
PLOD2
Procollagen-lysine,2-oxoglutarate 5-dioxygenase 2.
    
  0.885
PLOD3
Procollagen-lysine,2-oxoglutarate 5-dioxygenase 3.
    
  0.885
PLOD1
Procollagen-lysine,2-oxoglutarate 5-dioxygenase 1.
    
  0.885
SETD7
SET domain containing 7, histone lysine methyltransferase.
     
 0.859
DNMT3A
DNA methyltransferase 3 alpha.
    
 0.853
TRIM28
Tripartite motif containing 28.
    
 
 0.842
Your Current Organism:
Pteropus vampyrus
NCBI taxonomy Id: 132908
Other names: P. vampyrus, large flying fox
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.