STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FAM117AFamily with sequence similarity 117 member A. (454 aa)    
Predicted Functional Partners:
SLC35B1
Solute carrier family 35 member B1.
 
    
 0.565
PHOSPHO1
Phosphoethanolamine/phosphocholine phosphatase 1.
      
 0.508
UBE2Z
Ubiquitin conjugating enzyme E2 Z.
      
 0.499
DYRK1A
Dual specificity tyrosine phosphorylation regulated kinase 1A.
    
 
 0.424
DYRK1B
Dual specificity tyrosine phosphorylation regulated kinase 1B.
    
 
 0.409
DCAF7
DDB1 and CUL4 associated factor 7.
    
 
 0.407
SNF8
SNF8 subunit of ESCRT-II.
      
 0.400
Your Current Organism:
Pteropus vampyrus
NCBI taxonomy Id: 132908
Other names: P. vampyrus, large flying fox
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.