STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CHD6Chromodomain helicase DNA binding protein 6. (2700 aa)    
Predicted Functional Partners:
TRIM37
Tripartite motif containing 37.
    
 
 0.790
DPP3
Dipeptidyl peptidase 3.
    
 
 0.784
BAZ1A
Bromodomain adjacent to zinc finger domain 1A.
   
 0.774
RUVBL1
RuvB like AAA ATPase 1.
    
 0.757
ACTR5
Actin related protein 5.
    
 0.755
ARID4B
AT-rich interaction domain 4B.
   
 0.753
ARID4A
AT-rich interaction domain 4A.
   
 0.749
POLR2C
RNA polymerase II subunit C.
   
 0.746
POLR2F
RNA polymerase II subunit F.
   
 0.744
INO80D
INO80 complex subunit D.
   
 0.741
Your Current Organism:
Pteropus vampyrus
NCBI taxonomy Id: 132908
Other names: P. vampyrus, large flying fox
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.