STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABCG1ATP binding cassette subfamily G member 1. (725 aa)    
Predicted Functional Partners:
ABCG5
ATP binding cassette subfamily G member 5.
   
0.888
APOA1
Apolipoprotein A1.
   
 0.883
SCARB1
Scavenger receptor class B member 1.
      
 0.770
APOE
Apolipoprotein E.
      
 0.769
ABCC1
ATP binding cassette subfamily C member 1.
   
 0.739
ABCC5
ATP binding cassette subfamily C member 5.
   
 0.696
NR1H3
Nuclear receptor subfamily 1 group H member 3.
   
 0.674
PPARG
Peroxisome proliferator activated receptor gamma.
    
 0.653
HMGCR
3-hydroxy-3-methylglutaryl-CoA reductase.
      
 0.650
CDCA8
Cell division cycle associated 8.
   
 
 0.617
Your Current Organism:
Pteropus vampyrus
NCBI taxonomy Id: 132908
Other names: P. vampyrus, large flying fox
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.