STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TUBA1ATubulin alpha 1a. (451 aa)    
Predicted Functional Partners:
TUBB1
Tubulin beta 1 class VI.
  
0.928
TUBB6
Tubulin beta 6 class V.
  
0.927
TUBB
Tubulin beta class I.
  
0.927
ENSPVAP00000002843
annotation not available
  
0.923
TUBB2B
Tubulin beta 2B class IIb.
  
0.922
TUBB2A
Tubulin beta 2A class IIa.
  
0.921
TUBB4A
Tubulin beta 4A class IVa.
  
0.921
TUBB4B
Tubulin beta 4B class IVb.
  
0.921
MAPT
Microtubule associated protein tau.
    
 0.885
DCLK1
Doublecortin like kinase 1.
    
 
 0.871
Your Current Organism:
Pteropus vampyrus
NCBI taxonomy Id: 132908
Other names: P. vampyrus, large flying fox
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.