STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RNF183Ring finger protein 183. (188 aa)    
Predicted Functional Partners:
FATE1
Fetal and adult testis expressed 1.
    
 
 0.787
UBB
Ubiquitin B.
    
  0.672
ENSPVAP00000015543
annotation not available
    
  0.664
RANBP3L
RAN binding protein 3 like.
      
 0.560
RNF186
Ring finger protein 186.
    
 
 0.558
ICOS
Inducible T cell costimulator.
    
  0.553
RNF19A
Ring finger protein 19A, RBR E3 ubiquitin protein ligase.
    
 0.552
C9orf43
Chromosome 9 open reading frame 43.
      
 0.546
BSPRY
B-box and SPRY domain containing.
      
 0.544
UBE2L6
Ubiquitin conjugating enzyme E2 L6.
    
  0.528
Your Current Organism:
Pteropus vampyrus
NCBI taxonomy Id: 132908
Other names: P. vampyrus, large flying fox
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.