STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KDM5ALysine demethylase 5A. (1728 aa)    
Predicted Functional Partners:
ATP5F1D
ATP synthase F1 subunit delta.
  
 0.969
ATP5F1C
ATP synthase F1 subunit gamma.
  
 0.969
ENSPVAP00000010548
annotation not available
  
 0.969
ATP5F1A
ATP synthase F1 subunit alpha.
  
 0.969
ATP5PB
ATP synthase peripheral stalk-membrane subunit b.
   
 0.891
ATP5MC1
ATP synthase membrane subunit c locus 1.
  
 0.877
ATP6V0C
ATPase H+ transporting V0 subunit c.
  
 0.877
ATP5MC3
ATP synthase membrane subunit c locus 3.
  
 0.877
ATP6V0B
ATPase H+ transporting V0 subunit b.
  
 0.877
ENSPVAP00000011585
annotation not available
  
 0.877
Your Current Organism:
Pteropus vampyrus
NCBI taxonomy Id: 132908
Other names: P. vampyrus, large flying fox
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.