STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TBKBP1TBK1 binding protein 1. (574 aa)    
Predicted Functional Partners:
RANBP2
RAN binding protein 2.
   
 0.938
ENSPVAP00000002891
annotation not available
   
 0.925
ENSPVAP00000013896
annotation not available
   
 0.925
NUP153
Nucleoporin 153.
   
 0.924
SNUPN
Snurportin 1.
    
 0.922
NUP98
Nucleoporin 98.
   
 0.897
DKC1
Dyskerin pseudouridine synthase 1.
    
 
 0.864
RRP8
Ribosomal RNA processing 8.
    
   0.862
EXOSC10
Exosome component 10.
    
   0.862
H1-0
H1.0 linker histone.
    
   0.857
Your Current Organism:
Pteropus vampyrus
NCBI taxonomy Id: 132908
Other names: P. vampyrus, large flying fox
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.