STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PRRC1Proline rich coiled-coil 1. (466 aa)    
Predicted Functional Partners:
SEC23A
Sec23 homolog A, coat complex II component.
   
 
 0.694
TEX36
Testis expressed 36.
      
 0.605
TRAPPC2B
Trafficking protein particle complex 2B.
      
 0.569
FKBP11
FKBP prolyl isomerase 11.
      
 0.551
RRN3
RRN3 homolog, RNA polymerase I transcription factor.
      
 0.515
PAPSS2
3'-phosphoadenosine 5'-phosphosulfate synthase 2.
      
 0.505
SEC23B
SEC23 homolog B, coat complex II component.
   
 
 0.495
ENSPVAP00000009741
annotation not available
   
 
 0.478
SEC24D
SEC24 homolog D, COPII coat complex component.
   
 
 0.445
SEC24A
SEC24 homolog A, COPII coat complex component.
   
   0.440
Your Current Organism:
Pteropus vampyrus
NCBI taxonomy Id: 132908
Other names: P. vampyrus, large flying fox
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.