STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCNFCyclin F. (783 aa)    
Predicted Functional Partners:
SKP1
S-phase kinase associated protein 1.
    
 0.977
CUL1
Cullin 1.
    
 0.945
CDC20
Cell division cycle 20.
   
 0.930
CDC20B
Cell division cycle 20B.
   
 0.930
CDC6
Cell division cycle 6.
   
 0.923
ESPL1
Extra spindle pole bodies like 1, separase.
   
  
 0.921
SKP2
S-phase kinase associated protein 2.
   
 0.920
ENSPVAP00000016105
annotation not available
   
 0.858
CKS1B
CDC28 protein kinase regulatory subunit 1B.
   
 0.847
CKS2
CDC28 protein kinase regulatory subunit 2.
   
 0.847
Your Current Organism:
Pteropus vampyrus
NCBI taxonomy Id: 132908
Other names: P. vampyrus, large flying fox
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.