STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PUM1Pumilio RNA binding family member 1. (1222 aa)    
Predicted Functional Partners:
PUM2
Pumilio RNA binding family member 2.
  
0.948
CLINT1
Clathrin interactor 1.
   
 
 0.948
NANOS1
Nanos C2HC-type zinc finger 1.
   
 
 0.907
CNOT7
CCR4-NOT transcription complex subunit 7.
    
 
 0.901
ATXN1
Ataxin 1.
     
 0.882
SH3D19
SH3 domain containing 19.
     
 0.876
ENSPVAP00000001280
annotation not available
   
 
 0.773
GAK
Cyclin G associated kinase.
   
 0.770
MRPL19
Mitochondrial ribosomal protein L19.
    
 
 0.763
PRRC2C
Proline rich coiled-coil 2C.
   
 
 0.757
Your Current Organism:
Pteropus vampyrus
NCBI taxonomy Id: 132908
Other names: P. vampyrus, large flying fox
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.