STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LDLRAD4Low density lipoprotein receptor class A domain containing 4. (326 aa)    
Predicted Functional Partners:
ENSPVAP00000015762
annotation not available
    
 0.856
TSR1
TSR1 ribosome maturation factor.
   
  0.819
BYSL
Bystin like.
   
 0.805
FBL
Fibrillarin.
   
 
 0.782
ISM1
Isthmin 1.
     
 0.771
CIB1
Calcium and integrin binding 1.
      
 0.769
TRMT112
tRNA methyltransferase subunit 11-2.
   
 0.766
RRP12
Ribosomal RNA processing 12 homolog.
   
   0.763
MRPS5
Mitochondrial ribosomal protein S5.
   
 0.733
SMAD3
SMAD family member 3.
    
 0.732
Your Current Organism:
Pteropus vampyrus
NCBI taxonomy Id: 132908
Other names: P. vampyrus, large flying fox
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.