STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TNFAIP6TNF alpha induced protein 6. (276 aa)    
Predicted Functional Partners:
PTX3
Pentraxin 3.
   
 
 0.864
IL1B
Interleukin 1 beta.
   
 0.778
HAS2
Hyaluronan synthase 2.
   
  
 0.778
CD44
CD44 molecule (Indian blood group).
     
 0.718
CHRD
Chordin.
    
 
 0.717
TNFSF11
TNF superfamily member 11.
    
 0.717
ENSPVAP00000005315
annotation not available
    
0.702
COL22A1
Collagen type XXII alpha 1 chain.
    
 0.688
INHBA
Inhibin subunit beta A.
   
 
 0.683
CXCL10
C-X-C motif chemokine ligand 10.
   
 
 0.680
Your Current Organism:
Pteropus vampyrus
NCBI taxonomy Id: 132908
Other names: P. vampyrus, large flying fox
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.