STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TCEA1Transcription elongation factor A1. (300 aa)    
Predicted Functional Partners:
SUPT6H
SPT6 homolog, histone chaperone and transcription elongation factor.
    
 0.989
IWS1
Interacts with SUPT6H, CTD assembly factor 1.
    
 0.979
ERCC6
ERCC excision repair 6, chromatin remodeling factor.
    
 0.965
EAF1
ELL associated factor 1.
   
 0.964
ENSPVAP00000004796
annotation not available
    
 0.964
CTDP1
CTD phosphatase subunit 1.
   
 0.963
EAF2
ELL associated factor 2.
    
 0.963
POLR2B
RNA polymerase II subunit B.
   
 0.962
ELL
Elongation factor for RNA polymerase II.
    
 0.958
AFF4
AF4/FMR2 family member 4.
    
  0.954
Your Current Organism:
Pteropus vampyrus
NCBI taxonomy Id: 132908
Other names: P. vampyrus, large flying fox
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.