STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
USP28Ubiquitin specific peptidase 28. (1082 aa)    
Predicted Functional Partners:
CLSPN
Claspin.
    
 0.965
ENSPVAP00000015543
annotation not available
    
 0.929
UBA52
Ubiquitin A-52 residue ribosomal protein fusion product 1.
    
 0.926
UBB
Ubiquitin B.
   
 0.921
USP5
Ubiquitin specific peptidase 5.
   
 
 0.829
USP13
Ubiquitin specific peptidase 13.
   
 
 0.809
TP53BP1
Tumor protein p53 binding protein 1.
   
 
 0.803
NEDD8
NEDD8 ubiquitin like modifier.
    
 0.797
TRIP12
Thyroid hormone receptor interactor 12.
   
 
 0.793
ENSPVAP00000003840
annotation not available
    
 0.788
Your Current Organism:
Pteropus vampyrus
NCBI taxonomy Id: 132908
Other names: P. vampyrus, large flying fox
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.