STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MAP1LC3AMicrotubule associated protein 1 light chain 3 alpha. (121 aa)    
Predicted Functional Partners:
ENSPVAP00000005120
annotation not available
   
 0.997
FUNDC1
FUN14 domain containing 1.
    
 0.983
SQSTM1
Sequestosome 1.
   
 0.975
ATG7
Autophagy related 7.
   
 0.947
ATG4B
Autophagy related 4B cysteine peptidase.
   
 0.943
KEAP1
Kelch like ECH associated protein 1.
    
 0.941
ATG3
Autophagy related 3.
   
 0.936
ULK1
Unc-51 like autophagy activating kinase 1.
   
 0.916
GABARAPL2
GABA type A receptor associated protein like 2.
  
0.914
ATG12
Autophagy related 12.
   
 0.906
Your Current Organism:
Pteropus vampyrus
NCBI taxonomy Id: 132908
Other names: P. vampyrus, large flying fox
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.