STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADAMTS4ADAM metallopeptidase with thrombospondin type 1 motif 4. (834 aa)    
Predicted Functional Partners:
BCAN
Brevican.
     
 0.976
ACAN
Aggrecan.
     
 0.869
MMP13
Matrix metallopeptidase 13.
    
 
 0.789
COL2A1
Collagen type II alpha 1 chain.
    
 0.743
MMP12
Matrix metallopeptidase 12.
    
 
 0.645
MMP3
Matrix metallopeptidase 3.
    
 
 0.645
IL1B
Interleukin 1 beta.
      
 0.632
IL6
Interleukin 6.
   
  
 0.627
COL10A1
Collagen type X alpha 1 chain.
    
 0.623
MMP9
Matrix metallopeptidase 9.
      
 0.601
Your Current Organism:
Pteropus vampyrus
NCBI taxonomy Id: 132908
Other names: P. vampyrus, large flying fox
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.