STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFCAB3EF-hand calcium binding domain 3. (438 aa)    
Predicted Functional Partners:
CASK
Calcium/calmodulin dependent serine protein kinase.
    
 0.812
ENSPVAP00000005273
annotation not available
 
    
 0.809
ENSPVAP00000001866
annotation not available
    
 0.802
MYO1C
Myosin IC.
    
 0.802
CAMK2B
Calcium/calmodulin dependent protein kinase II beta.
    
 0.802
CAMK2A
Calcium/calmodulin dependent protein kinase II alpha.
    
 0.802
ITPKA
Inositol-trisphosphate 3-kinase A.
    
  0.776
PPP3CA
Protein phosphatase 3 catalytic subunit alpha.
    
 0.770
PPP3CC
Protein phosphatase 3 catalytic subunit gamma.
    
 0.770
ENSPVAP00000012136
annotation not available
      
 0.770
Your Current Organism:
Pteropus vampyrus
NCBI taxonomy Id: 132908
Other names: P. vampyrus, large flying fox
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.