STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BRF2BRF2 RNA polymerase III transcription initiation factor subunit. (421 aa)    
Predicted Functional Partners:
BDP1
B double prime 1, subunit of RNA polymerase III transcription initiation factor IIIB.
    
 0.995
TBP
TATA-box binding protein.
   
 0.982
GTF3C3
General transcription factor IIIC subunit 3.
    
 0.963
POLR3F
RNA polymerase III subunit F.
    
 0.961
POLR3B
RNA polymerase III subunit B.
   
 0.952
POLR3A
RNA polymerase III subunit A.
   
 0.933
POLR1C
RNA polymerase I and III subunit C.
    
 0.921
POLR2K
RNA polymerase II subunit K.
    
 0.912
TBPL2
TATA-box binding protein like 2.
   
 0.902
TBPL1
TATA-box binding protein like 1.
   
 0.896
Your Current Organism:
Pteropus vampyrus
NCBI taxonomy Id: 132908
Other names: P. vampyrus, large flying fox
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.