STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PAMPeptidylglycine alpha-amidating monooxygenase. (973 aa)    
Predicted Functional Partners:
VIM
Vimentin.
   
    0.627
FAM170A
Family with sequence similarity 170 member A.
      
 0.587
SCG3
Secretogranin III.
      
 0.584
CPE
Carboxypeptidase E.
   
  
 0.579
ATP7A
ATPase copper transporting alpha.
      
 0.575
PCSK2
Proprotein convertase subtilisin/kexin type 2.
   
  
 0.547
RASSF9
Ras association domain family member 9.
    
 
 0.546
GABRQ
Gamma-aminobutyric acid type A receptor theta subunit.
      
 0.516
HTR1F
5-hydroxytryptamine receptor 1F.
      
 0.510
ERP27
Endoplasmic reticulum protein 27.
      
 0.509
Your Current Organism:
Pteropus vampyrus
NCBI taxonomy Id: 132908
Other names: P. vampyrus, large flying fox
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.