STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TRIM9Tripartite motif containing 9. (795 aa)    
Predicted Functional Partners:
TRIM62
Tripartite motif containing 62.
      
 0.800
BTRC
Beta-transducin repeat containing E3 ubiquitin protein ligase.
    
 0.767
ENSPVAP00000000945
annotation not available
   
  
 0.747
CAPN5
Calpain 5.
      
 0.740
VASP
Vasodilator stimulated phosphoprotein.
    
 
 0.728
SNAP25
Synaptosome associated protein 25.
   
 
 0.713
DCC
DCC netrin 1 receptor.
   
 
 0.702
OPN4
Opsin 4.
      
 0.702
SOX12
SRY-box transcription factor 12.
      
 0.697
NEO1
Neogenin 1.
   
 
 0.696
Your Current Organism:
Pteropus vampyrus
NCBI taxonomy Id: 132908
Other names: P. vampyrus, large flying fox
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.