STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TRAM2Translocation associated membrane protein 2. (370 aa)    
Predicted Functional Partners:
DDOST
Dolichyl-diphosphooligosaccharide--protein glycosyltransferase non-catalytic subunit.
   
 
 0.767
SEC63
SEC63 homolog, protein translocation regulator.
   
 
 0.715
RPN2
Ribophorin II.
   
 
 0.610
EMILIN2
Elastin microfibril interfacer 2.
      
 0.599
TMED10
Transmembrane p24 trafficking protein 10.
   
  
 0.584
SLC25A21
Solute carrier family 25 member 21.
      
 0.571
LEMD3
LEM domain containing 3.
      
 0.564
SMG5
SMG5 nonsense mediated mRNA decay factor.
      
 0.558
TMX1
Thioredoxin related transmembrane protein 1.
   
  
 0.528
KLHL8
Kelch like family member 8.
      
 0.512
Your Current Organism:
Pteropus vampyrus
NCBI taxonomy Id: 132908
Other names: P. vampyrus, large flying fox
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.