STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
COL4A6Collagen type IV alpha 6 chain. (1669 aa)    
Predicted Functional Partners:
COL4A3
Collagen type IV alpha 3 chain.
  
0.972
COL4A5
Collagen type IV alpha 5 chain.
  
0.972
COL4A1
Collagen type IV alpha 1 chain.
  
0.971
COL6A2
Collagen type VI alpha 2 chain.
   
0.940
COL1A2
Collagen type I alpha 2 chain.
  
0.925
ITGA1
Integrin subunit alpha 1.
     
 0.913
ENSPVAP00000010065
annotation not available
  
0.906
ITGB6
Integrin subunit beta 6.
    
 0.903
ITGA2B
Integrin subunit alpha 2b.
    
 0.902
ITGA8
Integrin subunit alpha 8.
    
 0.901
Your Current Organism:
Pteropus vampyrus
NCBI taxonomy Id: 132908
Other names: P. vampyrus, large flying fox
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.