STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALLCAllantoicase. (365 aa)    
Predicted Functional Partners:
ENSPVAP00000007535
annotation not available
    
 0.770
TTR
Transthyretin.
  
 
 0.760
RPL36A
Ribosomal protein L36a.
   
 
 0.754
ENSPVAP00000012712
annotation not available
   
 
 0.754
DPYS
Dihydropyrimidinase.
  
 
 0.669
DPYSL5
Dihydropyrimidinase like 5.
  
 
 0.669
DPYSL4
Dihydropyrimidinase like 4.
  
 
 0.669
DPYSL3
Dihydropyrimidinase like 3.
  
 
 0.669
DPYSL2
Dihydropyrimidinase like 2.
  
 
 0.669
CRMP1
Collapsin response mediator protein 1.
  
 
 0.669
Your Current Organism:
Pteropus vampyrus
NCBI taxonomy Id: 132908
Other names: P. vampyrus, large flying fox
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.