STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
WDR48WD repeat domain 48. (677 aa)    
Predicted Functional Partners:
USP1
Ubiquitin specific peptidase 1.
    
 0.999
WDR20
WD repeat domain 20.
    
 0.996
USP12
Ubiquitin specific peptidase 12.
    
 0.994
USP46
Ubiquitin specific peptidase 46.
    
 0.994
FANCI
FA complementation group I.
    
 0.986
UBB
Ubiquitin B.
    
 0.951
RAD51AP1
RAD51 associated protein 1.
    
 
 0.943
DMWD
DM1 locus, WD repeat containing.
    
 0.937
ATAD5
ATPase family AAA domain containing 5.
   
 0.936
ENSPVAP00000015543
annotation not available
    
 0.933
Your Current Organism:
Pteropus vampyrus
NCBI taxonomy Id: 132908
Other names: P. vampyrus, large flying fox
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.