STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RNF8Ring finger protein 8. (487 aa)    
Predicted Functional Partners:
UBB
Ubiquitin B.
   
 0.999
ENSPVAP00000012950
annotation not available
  
 0.999
ENSPVAP00000015543
annotation not available
    
 0.999
UBA52
Ubiquitin A-52 residue ribosomal protein fusion product 1.
    
  0.999
UBE2V2
Ubiquitin conjugating enzyme E2 V2.
   
 0.979
RNF168
Ring finger protein 168.
     
 0.978
MDC1
Mediator of DNA damage checkpoint 1.
    
 0.978
HERC2
HECT and RLD domain containing E3 ubiquitin protein ligase 2.
   
 0.960
TMEM189-UBE2V1
TMEM189-UBE2V1 readthrough.
   
 0.942
RNF169
Ring finger protein 169.
     
 0.919
Your Current Organism:
Pteropus vampyrus
NCBI taxonomy Id: 132908
Other names: P. vampyrus, large flying fox
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.