STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDR39U1Short chain dehydrogenase/reductase family 39U member 1. (314 aa)    
Predicted Functional Partners:
STOML1
Stomatin like 1.
     
 0.809
ENSPVAP00000006645
annotation not available
      
 0.776
NCLN
Nicalin.
      
 0.776
STXBP6
Syntaxin binding protein 6.
      
 0.698
CBLN3
Cerebellin 3 precursor.
      
 0.694
AAGAB
Alpha and gamma adaptin binding protein.
      
 0.650
SLC36A4
Solute carrier family 36 member 4.
      
 0.596
ZNF646
Zinc finger protein 646.
      
 0.595
MORC2
MORC family CW-type zinc finger 2.
      
 0.595
NAGK
N-acetylglucosamine kinase.
      
 0.594
Your Current Organism:
Pteropus vampyrus
NCBI taxonomy Id: 132908
Other names: P. vampyrus, large flying fox
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.